PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G10780.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 318aa    MW: 33557.5 Da    PI: 6.5945
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G10780.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.31.8e-29143202159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dgy+WrKYGqK+ +++++pr+Y+rC++a +Cpvkkkv+r+aed ++++ tYegeHnh 
  OGLUM09G10780.1 143 VKDGYQWRKYGQKVTRDNPYPRAYFRCAFApSCPVKKKVQRCAEDRSMLVATYEGEHNHA 202
                      58***************************99****************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.5E-30135202IPR003657WRKY domain
PROSITE profilePS5081125.763138204IPR003657WRKY domain
SuperFamilySSF1182901.83E-25141203IPR003657WRKY domain
SMARTSM007741.6E-34143203IPR003657WRKY domain
PfamPF031062.0E-24144201IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009620Biological Processresponse to fungus
GO:0009751Biological Processresponse to salicylic acid
GO:0010200Biological Processresponse to chitin
GO:1900425Biological Processnegative regulation of defense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MDDDSDGSSS PTDDSAAAGL LPLFSRSPAE DLEEKLRRAM EENARLTRAL DAILAGHHAH  60
QRALLAPSLS PPPPSATARA PSVSTSCAAR EDAAPAVAAA AASTACPSRQ QPPTAEPRPK  120
VRTVRVRADA ADATDANSMA ETVKDGYQWR KYGQKVTRDN PYPRAYFRCA FAPSCPVKKK  180
VQRCAEDRSM LVATYEGEHN HALSTKTTEF VASGCTTSQH AGGSSSSPLP CSISINSSGR  240
TITLDLTNQA GSGSIASCGV EAAAVSGEIV TVLSPELRRH LVEEVVQVLK NDPEFVEAVT  300
NAVAARVVDQ IPHIPVHL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20138203973WRKY transcription factor 1
2lex_A2e-20130203476Probable WRKY transcription factor 4
1wj2_A2e-20130203476Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0678340.0AK067834.1 Oryza sativa Japonica Group cDNA clone:J013121C08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015610755.10.0PREDICTED: probable WRKY transcription factor 40
TrEMBLA0A0E0B3010.0A0A0E0B301_9ORYZ; Uncharacterized protein
STRINGBGIOSGA029757-PA0.0(Oryza sativa Indica Group)
STRINGLOC_Os09g25070.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129212834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.26e-38WRKY DNA-binding protein 18